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Creators/Authors contains: "Schmitt-Kopplin, Philippe"

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  1. Fundamental differences in DOM composition at the Bermuda Atlantic time series (BATS) stationversusthe Hawai’i time series station ALOHA. 
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  2. Abstract Infection of Arabidopsis with avirulentPseudomonas syringaeand exposure to nitrogen dioxide (NO2) both trigger hypersensitive cell death (HCD) that is characterized by the emission of bright blue‐green (BG) autofluorescence under UV illumination. The aim of our current work was to identify the BG fluorescent molecules and scrutinize their biosynthesis, localization, and functions during the HCD. Compared with wild‐type (WT) plants, the phenylpropanoid‐deficient mutantfah1developed normal HCD except for the absence of BG fluorescence. Ultrahigh resolution metabolomics combined with mass difference network analysis revealed that WT but notfah1plants rapidly accumulate dehydrodimers of sinapic acid, sinapoylmalate, 5‐hydroxyferulic acid, and 5‐hydroxyferuloylmalate during the HCD. FAH1‐dependent BG fluorescence appeared exclusively within dying cells of the upper epidermis as detected by microscopy. Saponification released dehydrodimers from cell wall polymers of WT but notfah1plants. Collectively, our data suggest that HCD induction leads to the formation of free BG fluorescent dehydrodimers from monomeric sinapates and 5‐hydroxyferulates. The formed dehydrodimers move from upper epidermis cells into the apoplast where they esterify cell wall polymers. Possible functions of phenylpropanoid dehydrodimers are discussed. 
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  3. Hydraulic fracturing requires the injection of large volumes of fluid to extract oil and gas from low permeability unconventional resources ( e.g. , shale, coalbed methane), resulting in the production of large volumes of highly complex and variable waste fluids. Shale gas fluid samples were collected from two hydraulically fractured wells in Morgantown, WV, USA at the Marcellus Shale Energy and Environment Laboratory (MSEEL) and analyzed using ultrahigh resolution mass spectrometry to investigate the dissolved organic sulfur (DOS) pool. Using a non-targeted approach, ions assigned DOS formulas were analyzed to identify dominant DOS classes, describe their temporal trends and their implications, and describe the molecular characteristics of the larger DOS pool. The average molecular weight of organic sulfur compounds in flowback decreased and was lowest in produced waters. The dominant DOS classes were putatively assigned to alcohol sulfate and alcohol ethoxysulfate surfactants, likely injected as fracturing fluid additives, on the basis of exact mass and homolog distribution matching. This DOS signature was identifiable 10 months after the initial injection of hydraulic fracturing fluid, and an absence of genes that code for alcohol ethoxysulfate degrading proteins ( e.g. , sulfatases) in the shale well genomes and metagenomes support that these additives are not readily degraded biologically and may continue to act as a chemical signature of the injected fluid. Understanding the diversity, lability, and fate of organic sulfur compounds in shale wells is important for engineering productive wells and preventing gas souring as well as understanding the consequences of unintended fluid release to the environment. The diversity of DOS, particularly more polar compounds, needs further investigation to determine if the identified characteristics and temporal patterns are unique to the analyzed wells or represent broader patterns found in other formations and under other operating conditions. 
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  4. Abstract Picocyanobacteria make up half of the ocean’s primary production, and they are subjected to frequent viral infection. Viral lysis of picocyanobacteria is a major driving force converting biologically fixed carbon into dissolved organic carbon (DOC). Viral-induced dissolved organic matter (vDOM) released from picocyanobacteria provides complex organic matter to bacterioplankton in the marine ecosystem. In order to understand how picocyanobacterial vDOM are transformed by bacteria and the impact of this process on bacterial community structure, viral lysate of picocyanobacteria was incubated with coastal seawater for 90 days. The transformation of vDOM was analyzed by ultrahigh-resolution mass spectrometry and the shift of bacterial populations analyzed using high-throughput sequencing technology. Addition of picocyanobacterial vDOM introduced abundant nitrogen components into the coastal water, which were largely degraded during the 90 days’ incubation period. However, some DOM signatures were accumulated and the total assigned formulae number increased over time. In contrast to the control (no addition of vDOM), bacterial community enriched with vDOM changed markedly with increased biodiversity indices. The network analysis showed that key bacterial species formed complex relationship with vDOM components, suggesting the potential correspondence between bacterial populations and DOM molecules. We demonstrate that coastal bacterioplankton are able to quickly utilize and transform lysis products of picocyanobacteria, meanwhile, bacterial community varies with changing chemodiverisity of DOM. vDOM released from picocyanobacteria generated a complex labile DOM pool, which was converted to a rather stable DOM pool after microbial processing in the time frame of days to weeks. 
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  5. Several areas around the world rely on seawater desalination to meet drinking water needs, but a detailed analysis of dissolved organic matter (DOM) changes and disinfection by-product (DBP) formation due to chlorination during the desalination processes has yet to be evaluated. To that end, DOM composition was analyzed in samples collected from a desalination plant using bulk measurements ( e.g. dissolved organic carbon, total dissolved nitrogen, total organic bromine), absorbance and fluorescence spectroscopy, and ultrahigh resolution mass spectrometry (HRMS). Water samples collected after chlorination ( e.g. post pretreatment (PT), reverse osmosis (RO) reject (brine wastewater) (BW), RO permeate (ROP), and drinking water (DW)), revealed that chlorination resulted in decreases in absorbance and increases in fluorescence apparent quantum yield spectra. All parameters measured were low or below detection in ROP and in DW. However, total solid phase extractable (Bond Elut Priority PolLutant (PPL) cartridges) organic bromine concentrations increased significantly in PT and BW samples and HRMS analysis revealed 392 molecular ions containing carbon, hydrogen, oxygen, bromine (CHOBr) and 107 molecular ions containing CHOBr + sulfur (CHOSBr) in BW PPL extracts. A network analysis between supposed DBP precursors suggested that the formation of CHOBr formulas could be explained largely by electrophilic substitution reactions, but also HOBr addition reactions. The reactions of sulfur containing compounds are more complex, and CHOSBr could possibly be due to the bromination of surfactant degradation products like sulfophenyl carboxylic acids (SPC) or even hydroxylated SPCs. Despite the identification of hundreds of DBPs, BW did not show any acute or chronic toxicity to mysid shrimp. High resolution MS/MS analysis was used to propose structures for highly abundant bromine-containing molecular formulas but given the complexity of DOM and DBPs found in this study, future work analyzing desalination samples during different times of year ( e.g. during algal blooms) and during different treatments is warranted. 
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